Deep, targeted amplicon sequencing with highly multiplexed panels for sequencing on Illumina® platforms.
* Not all genomes supported by the rhAmpSeq Design Tool are supported by the rhAmpSeq CRISPR Analysis Tool. See below for details.
Flexible tool input formats and advanced parameters help you create custom, targeted sequencing panels optimized for your targets:
Below are the available genomes supported by the rhAmpSeq analysis tool. While the design tool can support a larger set of genomes this should be considered if you plan to use the analysis tool
Genomes supported by the rhAmpSeq Analysis Tool |
---|
Caenorhabditis elegans – round worm (WBcel235) (IDT) |
Danio rerio – zebrafish (GRCz11) (IDT) |
Homo sapiens – human (GRCh37) (IDT) |
Homo sapiens – human (GRCh38) (IDT) |
Macaca fascicularis – crab-eating macaque (macFas5) (IDT) |
Macaca mulatta – rhesus monkey (rheMac8) (IDT) |
Mus musculus – mouse (GRCm38) (IDT) |
Rattus norvegicus – rat (Rnor6) (IDT) |
Custom rhAmpSeq Panels have been designed and tested in a wide range of animal and plant species and diverse targeted NGS applications, including:
After years of using traditional amplicon sequencing in grapevine, we found that rhAmpSeq’s specificity and evenness of read depth across sites and samples enabled us to multiplex to much higher levels. IDT provided agricultural pricing that enables us to apply 2000 core genome rhAmpSeq haplotype markers to genetic mapping and marker-assisted selection for grape scientists worldwide. ”